HL_7U2I_222
3D structure
- PDB id
- 7U2I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CUUCCCAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7U2I_222 not in the Motif Atlas
- Geometric match to HL_361D_002
- Geometric discrepancy: 0.395
- The information below is about HL_361D_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7U2I|1|2y|C|31
7U2I|1|2y|U|32
7U2I|1|2y|U|33
7U2I|1|2y|C|34
7U2I|1|2y|C|35
7U2I|1|2y|C|36
7U2I|1|2y|A|37
7U2I|1|2y|A|38
7U2I|1|2y|G|39
Current chains
- Chain 2y
- E-site Deacylated tRNAgly
Nearby chains
- Chain 2a
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2g
- 30S ribosomal protein S7
- Chain 2k
- 30S ribosomal protein S11
- Chain 2v
- MG-mRNA
- Chain 2x
- Transfer RNA; tRNA
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