HL_7UCJ_016

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCGAGACCCGU

Length

11 nucleotides

Bulged bases

7UCJ|1|5|C|967

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|5|G|961
7UCJ|1|5|C|962
7UCJ|1|5|G|963
7UCJ|1|5|A|964
7UCJ|1|5|G|965
7UCJ|1|5|A|966
7UCJ|1|5|C|967
7UCJ|1|5|C|968
7UCJ|1|5|C|969
7UCJ|1|5|G|970
7UCJ|1|5|U|971

Current chains

Chain 5

28s rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain E

60S ribosomal protein L6

Chain F

60S ribosomal protein L7