HL_7UCJ_033
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 7UCJ|1|5|C|2094, 7UCJ|1|5|U|2267, 7UCJ|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCJ|1|5|C|2087
7UCJ|1|5|A|2088
7UCJ|1|5|G|2089
7UCJ|1|5|U|2090
7UCJ|1|5|C|2091
7UCJ|1|5|G|2092
7UCJ|1|5|G|2093
7UCJ|1|5|C|2094
7UCJ|1|5|A|2095
7UCJ|1|5|G|2096
7UCJ|1|5|A|2097
7UCJ|1|5|G|2098
7UCJ|1|5|C|2099
7UCJ|1|5|G|2100
7UCJ|1|5|A|2101
7UCJ|1|5|G|2102
7UCJ|1|5|A|2103
7UCJ|1|5|A|2104
7UCJ|1|5|A|2105
7UCJ|1|5|G|2106
7UCJ|1|5|A|2107
7UCJ|1|5|G|2108
7UCJ|1|5|A|2109
7UCJ|1|5|G|2110
7UCJ|1|5|U|2111
7UCJ|1|5|G|2112
7UCJ|1|5|G|2113
7UCJ|1|5|C|2258
7UCJ|1|5|G|2259
7UCJ|1|5|C|2260
7UCJ|1|5|G|2261
7UCJ|1|5|G|2262
7UCJ|1|5|A|2263
7UCJ|1|5|C|2264
7UCJ|1|5|G|2265
7UCJ|1|5|C|2266
7UCJ|1|5|U|2267
7UCJ|1|5|A|2268
7UCJ|1|5|C|2269
7UCJ|1|5|G|2270
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- 60S ribosomal protein L7
- Chain Q
- 60S ribosomal protein L18
- Chain b
- 60S ribosomal protein L29
- Chain r
- 60S ribosomal protein L28
Coloring options: