HL_7UCJ_053
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(A2M)AGAAA(PSU)UC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UCJ_053 not in the Motif Atlas
- Geometric match to HL_8KAL_008
- Geometric discrepancy: 0.3451
- The information below is about HL_8KAL_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7UCJ|1|5|G|3722
7UCJ|1|5|A2M|3723
7UCJ|1|5|A|3724
7UCJ|1|5|G|3725
7UCJ|1|5|A|3726
7UCJ|1|5|A|3727
7UCJ|1|5|A|3728
7UCJ|1|5|PSU|3729
7UCJ|1|5|U|3730
7UCJ|1|5|C|3731
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain i
- 60S ribosomal protein L36
- Chain o
- 60S ribosomal protein L36a
Coloring options: