HL_7UCJ_088

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|9|G|377
7UCJ|1|9|U|378
7UCJ|1|9|C|379
7UCJ|1|9|G|380
7UCJ|1|9|C|381
7UCJ|1|9|C|382
7UCJ|1|9|G|383
7UCJ|1|9|U|384
7UCJ|1|9|G|385
7UCJ|1|9|C|386
7UCJ|1|9|C|387

Current chains

Chain 9

18S rRNA

Nearby chains

Chain II

40S ribosomal protein S8

Chain LL

40S ribosomal protein S11