HL_7UCJ_122

3D structure

PDB id

7UCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S translation initiation complex with mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCJ|1|9|U|885
7UCJ|1|9|A|886
7UCJ|1|9|U|887
7UCJ|1|9|U|888
7UCJ|1|9|U|889
7UCJ|1|9|U|890
7UCJ|1|9|G|891
7UCJ|1|9|U|892
7UCJ|1|9|U|893
7UCJ|1|9|G|894
7UCJ|1|9|G|895
7UCJ|1|9|U|896
7UCJ|1|9|U|897
7UCJ|1|9|U|898
7UCJ|1|9|U|899
7UCJ|1|9|C|900
7UCJ|1|9|G|901

Current chains

Chain 9

18S rRNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain LL

40S ribosomal protein S11