HL_7UCK_018
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- C(OMG)UCUUG(1MA)AAC(A2M)CG
- Length
- 14 nucleotides
- Bulged bases
- 7UCK|1|5|C|1325
- QA status
- Modified nucleotides: OMG, 1MA, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UCK_018 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1758
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7UCK|1|5|C|1315
7UCK|1|5|OMG|1316
7UCK|1|5|U|1317
7UCK|1|5|C|1318
7UCK|1|5|U|1319
7UCK|1|5|U|1320
7UCK|1|5|G|1321
7UCK|1|5|1MA|1322
7UCK|1|5|A|1323
7UCK|1|5|A|1324
7UCK|1|5|C|1325
7UCK|1|5|A2M|1326
7UCK|1|5|C|1327
7UCK|1|5|G|1328
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain C
- 60S ribosomal protein L4
- Chain a
- 60S ribosomal protein L27a
- Chain e
- 60S ribosomal protein L32
Coloring options: