3D structure

PDB id
7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GUAUUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UG6_074 not in the Motif Atlas
Homologous match to HL_5TBW_076
Geometric discrepancy: 0.2119
The information below is about HL_5TBW_076
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_45177.3
Basepair signature
cWW-F-F-F
Number of instances in this motif group
3

Unit IDs

7UG6|1|2|G|124
7UG6|1|2|U|125
7UG6|1|2|A|126
7UG6|1|2|U|127
7UG6|1|2|U|128
7UG6|1|2|C|129

Current chains

Chain 2
5.8S rRNA

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain X
60S ribosomal protein L25

Coloring options:


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