3D structure

PDB id
7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGUGAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UG6_076 not in the Motif Atlas
Homologous match to HL_7A0S_070
Geometric discrepancy: 0.1935
The information below is about HL_7A0S_070
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.7
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
349

Unit IDs

7UG6|1|3|G|88
7UG6|1|3|G|89
7UG6|1|3|U|90
7UG6|1|3|G|91
7UG6|1|3|A|92
7UG6|1|3|C|93

Current chains

Chain 3
5S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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