HL_7UG7_003

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_003 not in the Motif Atlas

Homologous match to HL_4LFB_003

Geometric discrepancy: 0.124

The information below is about HL_4LFB_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7UG7|1|16|G|158
7UG7|1|16|G|159
7UG7|1|16|A|160
7UG7|1|16|A|161
7UG7|1|16|A|162
7UG7|1|16|C|163

Current chains

Chain 16

16S rRNA

Nearby chains

Chain LS

50S ribosomal protein L19

Chain ST

30S ribosomal protein S20