HL_7UG7_012

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.3182

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UG7|1|16|G|462
7UG7|1|16|U|463
7UG7|1|16|U|464
7UG7|1|16|A|465
7UG7|1|16|A|466
7UG7|1|16|U|467
7UG7|1|16|A|468
7UG7|1|16|C|469
7UG7|1|16|C|470

Current chains

Chain 16

16S rRNA

Nearby chains