3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
GAAACAUC
Length
8 nucleotides
Bulged bases
7UG7|1|23|A|196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UG7_037 not in the Motif Atlas
Geometric match to HL_5J7L_139
Geometric discrepancy: 0.0791
The information below is about HL_5J7L_139
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7UG7|1|23|G|194
7UG7|1|23|A|195
7UG7|1|23|A|196
7UG7|1|23|A|197
7UG7|1|23|C|198
7UG7|1|23|A|199
7UG7|1|23|U|200
7UG7|1|23|C|201

Current chains

Chain 23
23S rRNA

Nearby chains

Chain Dt
Transfer RNA; tRNA
Chain LO
50S ribosomal protein L15
Chain Lb
50S ribosomal protein L28

Coloring options:


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