HL_7UG7_042

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GUGACAGCC

Length

9 nucleotides

Bulged bases

7UG7|1|23|G|329, 7UG7|1|23|A|330, 7UG7|1|23|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_042 not in the Motif Atlas

Geometric match to HL_7RQB_012

Geometric discrepancy: 0.0858

The information below is about HL_7RQB_012

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_08002.9

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

19

Unit IDs

7UG7|1|23|G|327
7UG7|1|23|U|328
7UG7|1|23|G|329
7UG7|1|23|A|330
7UG7|1|23|C|331
7UG7|1|23|A|332
7UG7|1|23|G|333
7UG7|1|23|C|334
7UG7|1|23|C|335

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4

Chain LX

50S ribosomal protein L24