HL_7UG7_044

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7UG7|1|23|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_044 not in the Motif Atlas

Geometric match to HL_5J7L_146

Geometric discrepancy: 0.0643

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7UG7|1|23|G|410
7UG7|1|23|G|411
7UG7|1|23|A|412
7UG7|1|23|C|413
7UG7|1|23|C|414
7UG7|1|23|A|415
7UG7|1|23|U|416
7UG7|1|23|C|417

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LO

50S ribosomal protein L15