HL_7UG7_049

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

7UG7|1|23|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_049 not in the Motif Atlas

Geometric match to HL_4V9F_036

Geometric discrepancy: 0.254

The information below is about HL_4V9F_036

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7UG7|1|23|C|611
7UG7|1|23|G|612
7UG7|1|23|A|613
7UG7|1|23|A|614
7UG7|1|23|U|615
7UG7|1|23|A|616
7UG7|1|23|G|617

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4