HL_7UG7_071

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGACAC(6MZ)G

Length

8 nucleotides

Bulged bases

7UG7|1|23|A|1614, 7UG7|1|23|A|1616

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_071 not in the Motif Atlas

Homologous match to HL_5J7L_173

Geometric discrepancy: 0.0814

The information below is about HL_5J7L_173

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7UG7|1|23|C|1612
7UG7|1|23|G|1613
7UG7|1|23|A|1614
7UG7|1|23|C|1615
7UG7|1|23|A|1616
7UG7|1|23|C|1617
7UG7|1|23|6MZ|1618
7UG7|1|23|G|1619

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LV

50S ribosomal protein L22

Chain Lh

50S ribosomal protein L34