HL_7UG7_084

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7UG7|1|23|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_084 not in the Motif Atlas

Geometric match to HL_4WF9_049

Geometric discrepancy: 0.1036

The information below is about HL_4WF9_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7UG7|1|23|C|2248
7UG7|1|23|U|2249
7UG7|1|23|G|2250
7UG7|1|23|OMG|2251
7UG7|1|23|G|2252
7UG7|1|23|G|2253
7UG7|1|23|C|2254
7UG7|1|23|G|2255
7UG7|1|23|G|2256

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LP

50S ribosomal protein L16

Chain La

50S ribosomal protein L27

Chain Pt

Transfer RNA; tRNA