HL_7UG7_091

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_091 not in the Motif Atlas

Geometric match to HL_5J7L_193

Geometric discrepancy: 0.1109

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7UG7|1|23|A|2471
7UG7|1|23|G|2472
7UG7|1|23|U|2473
7UG7|1|23|U|2474
7UG7|1|23|C|2475
7UG7|1|23|A|2476
7UG7|1|23|U|2477
7UG7|1|23|A|2478
7UG7|1|23|U|2479

Current chains

Chain 23

23S rRNA

Nearby chains

Chain EF

Elongation factor G

Chain LF

50S ribosomal protein L6

Chain Lj

50S ribosomal protein L36