3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
CAUGCCG
Length
7 nucleotides
Bulged bases
7UG7|1|5|G|41
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UG7_101 not in the Motif Atlas
Homologous match to HL_7RQB_070
Geometric discrepancy: 0.0973
The information below is about HL_7RQB_070
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_87939.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
8

Unit IDs

7UG7|1|5|C|38
7UG7|1|5|A|39
7UG7|1|5|U|40
7UG7|1|5|G|41
7UG7|1|5|C|42
7UG7|1|5|C|43
7UG7|1|5|G|44

Current chains

Chain 5
5S rRNA

Nearby chains

Chain 23
Large subunit ribosomal RNA; LSU rRNA
Chain LE
50S ribosomal protein L5
Chain LR
50S ribosomal protein L18
Chain Le
50S ribosomal protein L31

Coloring options:


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