HL_7UG7_104
3D structure
- PDB id
- 7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- G(OMC)UCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- 7UG7|1|Dt|U|34
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UG7_104 not in the Motif Atlas
- Geometric match to HL_4TUE_034
- Geometric discrepancy: 0.0915
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7UG7|1|Dt|G|32
7UG7|1|Dt|OMC|33
7UG7|1|Dt|U|34
7UG7|1|Dt|C|35
7UG7|1|Dt|A|36
7UG7|1|Dt|U|37
7UG7|1|Dt|A|38
7UG7|1|Dt|A|39
7UG7|1|Dt|C|40
Current chains
- Chain Dt
- tRNA-fMet
Nearby chains
- Chain 16
- Small subunit ribosomal RNA; SSU rRNA
- Chain Pt
- Transfer RNA; tRNA
- Chain SI
- 30S ribosomal protein S9
- Chain mR
- mRNA
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