3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UGGCGAG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UNR_008 not in the Motif Atlas
Geometric match to HL_7RQB_008
Geometric discrepancy: 0.1273
The information below is about HL_7RQB_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_67216.7
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
9

Unit IDs

7UNR|1|A|U|246
7UNR|1|A|G|247
7UNR|1|A|G|248
7UNR|1|A|C|249
7UNR|1|A|G|250
7UNR|1|A|A|251
7UNR|1|A|G|252

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 7
50S ribosomal protein L35
Chain N
50S ribosomal protein L15

Coloring options:


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