HL_7UNR_027

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_027 not in the Motif Atlas

Geometric match to HL_5J7L_160

Geometric discrepancy: 0.1155

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7UNR|1|A|G|968
7UNR|1|A|A|969
7UNR|1|A|A|970
7UNR|1|A|A|971
7UNR|1|A|C|972
7UNR|1|A|A|973
7UNR|1|A|A|974
7UNR|1|A|C|975

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain S

50S ribosomal protein L20