3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CUUAGAAGCAG
Length
11 nucleotides
Bulged bases
7UNR|1|A|A|1060
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UNR_028 not in the Motif Atlas
Geometric match to HL_6PRV_001
Geometric discrepancy: 0.136
The information below is about HL_6PRV_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_19210.3
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7UNR|1|A|C|1054
7UNR|1|A|U|1055
7UNR|1|A|U|1056
7UNR|1|A|A|1057
7UNR|1|A|G|1058
7UNR|1|A|A|1059
7UNR|1|A|A|1060
7UNR|1|A|G|1061
7UNR|1|A|C|1062
7UNR|1|A|A|1063
7UNR|1|A|G|1064

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain J
50S ribosomal protein L11
Chain x
Translation initiation factor IF-2

Coloring options:


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