HL_7UNR_035

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7UNR|1|A|U|1383, 7UNR|1|A|U|1384

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_035 not in the Motif Atlas

Geometric match to HL_4V9F_037

Geometric discrepancy: 0.1343

The information below is about HL_4V9F_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7UNR|1|A|G|1376
7UNR|1|A|U|1377
7UNR|1|A|U|1378
7UNR|1|A|A|1379
7UNR|1|A|A|1380
7UNR|1|A|U|1381
7UNR|1|A|A|1382
7UNR|1|A|U|1383
7UNR|1|A|U|1384
7UNR|1|A|C|1385

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L23