HL_7UNR_050

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

7UNR|1|A|A|2018, 7UNR|1|A|G|2019

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_050 not in the Motif Atlas

Homologous match to HL_5J7L_183

Geometric discrepancy: 0.0964

The information below is about HL_5J7L_183

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.2

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

8

Unit IDs

7UNR|1|A|G|2014
7UNR|1|A|U|2015
7UNR|1|A|G|2016
7UNR|1|A|6MZ|2017
7UNR|1|A|A|2018
7UNR|1|A|G|2019
7UNR|1|A|A|2020
7UNR|1|A|U|2021
7UNR|1|A|G|2022
7UNR|1|A|C|2023

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain T

50S ribosomal protein L21