HL_7UNR_062

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_062 not in the Motif Atlas

Geometric match to HL_4WF9_058

Geometric discrepancy: 0.1506

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7UNR|1|A|C|2538
7UNR|1|A|OMU|2539
7UNR|1|A|G|2540
7UNR|1|A|U|2541
7UNR|1|A|U|2542
7UNR|1|A|C|2543
7UNR|1|A|G|2544

Current chains

Chain A

23S Ribosomal RNA

Nearby chains