HL_7UNR_083

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7UNR|1|a|U|461

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_083 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.348

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UNR|1|a|G|456
7UNR|1|a|U|457
7UNR|1|a|U|458
7UNR|1|a|A|459
7UNR|1|a|A|460
7UNR|1|a|U|461
7UNR|1|a|A|462
7UNR|1|a|C|463
7UNR|1|a|C|464

Current chains

Chain a

16S Ribosomal RNA

Nearby chains