3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
GAAACAAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UNW_027 not in the Motif Atlas
Geometric match to HL_5J7L_160
Geometric discrepancy: 0.1038
The information below is about HL_5J7L_160
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_42998.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7UNW|1|A|G|968
7UNW|1|A|A|969
7UNW|1|A|A|970
7UNW|1|A|A|971
7UNW|1|A|C|972
7UNW|1|A|A|973
7UNW|1|A|A|974
7UNW|1|A|C|975

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain S
50S ribosomal protein L20
Chain T
50S ribosomal protein L21

Coloring options:


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