HL_7UNW_028

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7UNW|1|A|A|1060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_028 not in the Motif Atlas

Geometric match to HL_3CUL_003

Geometric discrepancy: 0.3148

The information below is about HL_3CUL_003

Detailed Annotation

T-loop related

Broad Annotation

T-loop related

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7UNW|1|A|C|1054
7UNW|1|A|U|1055
7UNW|1|A|U|1056
7UNW|1|A|A|1057
7UNW|1|A|G|1058
7UNW|1|A|A|1059
7UNW|1|A|A|1060
7UNW|1|A|G|1061
7UNW|1|A|C|1062
7UNW|1|A|A|1063
7UNW|1|A|G|1064

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L11