HL_7UNW_054

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGUCGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_054 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1139

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7UNW|1|A|G|2290
7UNW|1|A|G|2291
7UNW|1|A|U|2292
7UNW|1|A|C|2293
7UNW|1|A|G|2294
7UNW|1|A|G|2295
7UNW|1|A|A|2296
7UNW|1|A|A|2297
7UNW|1|A|A|2298
7UNW|1|A|U|2299
7UNW|1|A|C|2300

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5