3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CCUGAGGG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UNW_106 not in the Motif Atlas
Geometric match to HL_2ZZM_002
Geometric discrepancy: 0.2934
The information below is about HL_2ZZM_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_13963.3
Basepair signature
cWW-F-F
Number of instances in this motif group
4

Unit IDs

7UNW|1|a|C|179
7UNW|1|a|C|180
7UNW|1|a|U|181
7UNW|1|a|G|182
7UNW|1|a|A|183
7UNW|1|a|G|184
7UNW|1|a|G|185
7UNW|1|a|G|186

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain t
30S ribosomal protein S20

Coloring options:


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