HL_7UOO_012

3D structure

PDB id

7UOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

UUGCCUCGGUAA

Length

12 nucleotides

Bulged bases

7UOO|1|1|U|545, 7UOO|1|1|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UOO|1|1|U|540
7UOO|1|1|U|541
7UOO|1|1|G|542
7UOO|1|1|C|543
7UOO|1|1|C|544
7UOO|1|1|U|545
7UOO|1|1|C|546
7UOO|1|1|G|547
7UOO|1|1|G|548
7UOO|1|1|U|549
7UOO|1|1|A|550
7UOO|1|1|A|551

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 5

rRNA-processing protein