HL_7UOO_059
3D structure
- PDB id
- 7UOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.34 Å
Loop
- Sequence
- U(OMU)(OMG)(PSU)UCA
- Length
- 7 nucleotides
- Bulged bases
- 7UOO|1|1|C|2925
- QA status
- Modified nucleotides: OMU, OMG, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UOO_059 not in the Motif Atlas
- Geometric match to HL_4TUW_002
- Geometric discrepancy: 0.2638
- The information below is about HL_4TUW_002
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_12626.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 17
Unit IDs
7UOO|1|1|U|2920
7UOO|1|1|OMU|2921
7UOO|1|1|OMG|2922
7UOO|1|1|PSU|2923
7UOO|1|1|U|2924
7UOO|1|1|C|2925
7UOO|1|1|A|2926
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain b
- Nucleolar GTP-binding protein 1
- Chain m
- Nucleolar GTP-binding protein 2
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