HL_7UQZ_020

3D structure

PDB id

7UQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.44 Å

Loop

Sequence

G(A2M)CGUGCAAAUC

Length

12 nucleotides

Bulged bases

7UQZ|1|1|U|879, 7UQZ|1|1|A|883, 7UQZ|1|1|A|884

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UQZ|1|1|G|875
7UQZ|1|1|A2M|876
7UQZ|1|1|C|877
7UQZ|1|1|G|878
7UQZ|1|1|U|879
7UQZ|1|1|G|880
7UQZ|1|1|C|881
7UQZ|1|1|A|882
7UQZ|1|1|A|883
7UQZ|1|1|A|884
7UQZ|1|1|U|885
7UQZ|1|1|C|886

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain P

60S ribosomal protein L17-A

Chain b

Nucleolar GTP-binding protein 1

Chain j

60S ribosomal protein L37-A