HL_7URM_001

3D structure

PDB id

7URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

allo-tRNAUTu1A in the P site of the E. coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGGUG

Length

6 nucleotides

Bulged bases

7URM|1|v|G|18

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7URM_001 not in the Motif Atlas

Geometric match to HL_3RG5_005

Geometric discrepancy: 0.2187

The information below is about HL_3RG5_005

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_18141.3

Basepair signature

cWW-F-cSH

Number of instances in this motif group

6

Unit IDs

7URM|1|v|C|15
7URM|1|v|U|16
7URM|1|v|G|18
7URM|1|v|G|19
7URM|1|v|U|20
7URM|1|v|G|20|||A

Current chains

Chain v

allo-tRNAUTU1A

Nearby chains