HL_7URM_004

3D structure

PDB id

7URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

allo-tRNAUTu1A in the P site of the E. coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUCGAUUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7URM_004 not in the Motif Atlas

Geometric match to HL_7UZ0_003

Geometric discrepancy: 0.1217

The information below is about HL_7UZ0_003

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_33597.3

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

135

Unit IDs

7URM|1|v|G|53
7URM|1|v|U|54
7URM|1|v|U|55
7URM|1|v|C|56
7URM|1|v|G|57
7URM|1|v|A|58
7URM|1|v|U|59
7URM|1|v|U|60
7URM|1|v|C|61

Current chains

Chain v

allo-tRNAUTU1A

Nearby chains