HL_7UVV_038

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7UVV|1|A|A|1612, 7UVV|1|A|A|1614, 7UVV|1|A|A|1616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVV_038 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.0821

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

7UVV|1|A|C|1610
7UVV|1|A|G|1611
7UVV|1|A|A|1612
7UVV|1|A|C|1613
7UVV|1|A|A|1614
7UVV|1|A|C|1615
7UVV|1|A|A|1616
7UVV|1|A|G|1617

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain R

50S ribosomal protein L22