HL_7UVV_061

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVV_061 not in the Motif Atlas

Geometric match to HL_4V9F_066

Geometric discrepancy: 0.0801

The information below is about HL_4V9F_066

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7UVV|1|A|C|2654
7UVV|1|A|G|2655
7UVV|1|A|A|2656
7UVV|1|A|G|2657
7UVV|1|A|A|2658
7UVV|1|A|G|2659

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L6