HL_7UVV_076

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GACUGAGACACGGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVV_076 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0886

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7UVV|1|a|G|316
7UVV|1|a|A|317
7UVV|1|a|C|318
7UVV|1|a|U|319
7UVV|1|a|G|320
7UVV|1|a|A|321
7UVV|1|a|G|322
7UVV|1|a|A|323
7UVV|1|a|C|324
7UVV|1|a|A|325
7UVV|1|a|C|326
7UVV|1|a|G|327
7UVV|1|a|G|328
7UVV|1|a|C|329

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20