HL_7UVV_080

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7UVV|1|a|U|463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVV_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1814

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UVV|1|a|G|458
7UVV|1|a|U|459
7UVV|1|a|U|460
7UVV|1|a|A|461
7UVV|1|a|A|462
7UVV|1|a|U|463
7UVV|1|a|A|464
7UVV|1|a|C|465
7UVV|1|a|C|466

Current chains

Chain a

16s Ribosomal RNA

Nearby chains