HL_7UVW_008

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_008 not in the Motif Atlas

Homologous match to HL_7RQB_008

Geometric discrepancy: 0.0835

The information below is about HL_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67216.7

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

9

Unit IDs

7UVW|1|A|C|253
7UVW|1|A|G|254
7UVW|1|A|G|255
7UVW|1|A|C|256
7UVW|1|A|G|257
7UVW|1|A|A|258
7UVW|1|A|G|259

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L35

Chain K

50S ribosomal protein L15

Chain v

Transfer RNA; tRNA