HL_7UVW_040

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7UVW|1|A|U|1691

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_040 not in the Motif Atlas

Geometric match to HL_4V9F_044

Geometric discrepancy: 0.0813

The information below is about HL_4V9F_044

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

7UVW|1|A|C|1689
7UVW|1|A|U|1690
7UVW|1|A|U|1691
7UVW|1|A|C|1692
7UVW|1|A|G|1693
7UVW|1|A|G|1694

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA