HL_7UVW_047

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

7UVW|1|A|A|2027, 7UVW|1|A|G|2028

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_047 not in the Motif Atlas

Homologous match to HL_5J7L_183

Geometric discrepancy: 0.1073

The information below is about HL_5J7L_183

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7UVW|1|A|G|2023
7UVW|1|A|U|2024
7UVW|1|A|G|2025
7UVW|1|A|6MZ|2026
7UVW|1|A|A|2027
7UVW|1|A|G|2028
7UVW|1|A|A|2029
7UVW|1|A|U|2030
7UVW|1|A|G|2031
7UVW|1|A|C|2032

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain Q

50S ribosomal protein L21

Chain Z

50S ribosomal protein L32