HL_7UVW_065

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_065 not in the Motif Atlas

Homologous match to HL_7A0S_068

Geometric discrepancy: 0.099

The information below is about HL_7A0S_068

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7UVW|1|A|A|2852
7UVW|1|A|G|2853
7UVW|1|A|U|2854
7UVW|1|A|G|2855
7UVW|1|A|A|2856
7UVW|1|A|U|2857

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L19