HL_7UVW_075

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GACUGAGACACGGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_075 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.09

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7UVW|1|a|G|316
7UVW|1|a|A|317
7UVW|1|a|C|318
7UVW|1|a|U|319
7UVW|1|a|G|320
7UVW|1|a|A|321
7UVW|1|a|G|322
7UVW|1|a|A|323
7UVW|1|a|C|324
7UVW|1|a|A|325
7UVW|1|a|C|326
7UVW|1|a|G|327
7UVW|1|a|G|328
7UVW|1|a|C|329

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20