3D structure

PDB id
7UVW (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.37 Å

Loop

Sequence
GAUCAGAAUGC
Length
11 nucleotides
Bulged bases
7UVW|1|a|U|1361
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UVW_097 not in the Motif Atlas
Homologous match to HL_4LFB_030
Geometric discrepancy: 0.0833
The information below is about HL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_86432.1
Basepair signature
cWW-tWH-tWH-F-F-F
Number of instances in this motif group
5

Unit IDs

7UVW|1|a|G|1353
7UVW|1|a|A|1354
7UVW|1|a|U|1355
7UVW|1|a|C|1356
7UVW|1|a|A|1357
7UVW|1|a|G|1358
7UVW|1|a|A|1359
7UVW|1|a|A|1360
7UVW|1|a|U|1361
7UVW|1|a|G|1362
7UVW|1|a|C|1363

Current chains

Chain a
16s Ribosomal RNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:


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