HL_7UVW_101

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

ACUCAUAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_101 not in the Motif Atlas

Homologous match to HL_3TUP_002

Geometric discrepancy: 0.1673

The information below is about HL_3TUP_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_81376.1

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

29

Unit IDs

7UVW|1|v|A|32
7UVW|1|v|C|33
7UVW|1|v|U|34
7UVW|1|v|C|35
7UVW|1|v|A|36
7UVW|1|v|U|37
7UVW|1|v|A|38
7UVW|1|v|A|39
7UVW|1|v|U|40

Current chains

Chain v

tRNA-met

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain i

30S ribosomal protein S9

Chain w

mRNA