HL_7UVY_020

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

UUAAUAG

Length

7 nucleotides

Bulged bases

7UVY|1|A|U|643

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVY_020 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.1868

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7UVY|1|A|U|639
7UVY|1|A|U|640
7UVY|1|A|A|641
7UVY|1|A|A|642
7UVY|1|A|U|643
7UVY|1|A|A|644
7UVY|1|A|G|645

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L33

Chain 2

50S ribosomal protein L35