HL_7UVY_099

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

UGCAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVY_099 not in the Motif Atlas

Geometric match to HL_3OXE_002

Geometric discrepancy: 0.1997

The information below is about HL_3OXE_002

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7UVY|1|a|U|1446
7UVY|1|a|G|1447
7UVY|1|a|C|1448
7UVY|1|a|A|1449
7UVY|1|a|A|1450
7UVY|1|a|A|1451

Current chains

Chain a

16s Ribosomal RNA

Nearby chains