HL_7UVZ_065

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGAGACUAG

Length

9 nucleotides

Bulged bases

7UVZ|1|A|G|2816

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVZ_065 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.1046

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7UVZ|1|A|C|2815
7UVZ|1|A|G|2816
7UVZ|1|A|A|2817
7UVZ|1|A|G|2818
7UVZ|1|A|A|2819
7UVZ|1|A|C|2820
7UVZ|1|A|U|2821
7UVZ|1|A|A|2822
7UVZ|1|A|G|2823

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain M

50S ribosomal protein L17

Chain O

50S ribosomal protein L19